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GMX-DUMP(1)			    GROMACS			   GMX-DUMP(1)

NAME
       gmx-dump	- Make binary files human readable

SYNOPSIS
	  gmx dump [-s _.tpr_] [-f _.xtc/.trr/..._] [-e	_.edr_]	[-cp _.cpt_]
		   [-p _.top_] [-mtx _.mtx_] [-om _.mdp_] [-[no]nr]
		   [-[no]param]	[-[no]sys] [-[no]orgir]

DESCRIPTION
       gmx  dump  reads	a run input file (.tpr), a trajectory (.trr/.xtc/tng),
       an energy file (.edr), a	checkpoint file	(.cpt) or topology file	(.top)
       and  prints that	to standard output in a	readable format.  This program
       is essential for	checking your run input	file in	case of	problems.

OPTIONS
       Options to specify input	files:

       -s <.tpr> (Optional)
	      Run input	file to	dump

       -f <.xtc/.trr/^a|> (Optional)
	      Trajectory file to dump: xtc trr cpt gro g96 pdb tng

       -e <.edr> (Optional)
	      Energy file to dump

       -cp <.cpt> (Optional)
	      Checkpoint file to dump

       -p <.top> (Optional)
	      Topology file to dump

       -mtx <.mtx> (Optional)
	      Hessian matrix to	dump

       Options to specify output files:

       -om <.mdp> (Optional)
	      grompp input file	from run input file

       Other options:

       -[no]nr (yes)
	      Show index numbers in output (leaving them out makes  comparison
	      easier, but creates a useless topology)

       -[no]param (no)
	      Show  parameters	for  each  bonded  interaction	(for comparing
	      dumps, it	is useful to combine this with -nonr)

       -[no]sys	(no)
	      List the atoms and bonded	interactions for the whole system  in-
	      stead of for each	molecule type

       -[no]orgir (no)
	      Show  input parameters from tpr as they were written by the ver-
	      sion that	produced the file, instead of how the current  version
	      reads them

KNOWN ISSUES
       o The .mdp file produced	by -om can not be read by grompp.

SEE ALSO
       gmx(1)

       More	information    about	GROMACS	   is	 available    at    <-
       http://www.gromacs.org/>.

COPYRIGHT
       2020, GROMACS development team

2020.3				 Jul 09, 2020			   GMX-DUMP(1)

NAME | SYNOPSIS | DESCRIPTION | OPTIONS | KNOWN ISSUES | SEE ALSO | COPYRIGHT

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