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BP_PARSE_HMMSEARCH(1) User Contributed Perl DocumentationBP_PARSE_HMMSEARCH(1)

NAME
       bp_parse_hmmsearch - parse single/multiple HMMSEARCH results file(s)
       with
			 different output options

SYNOPSIS
       bp_parse_hmmsearch [--po] [--ps]	-s hmmsearch_file

       bp_parse_hmmsearch [--po] [--ps]	-m index_file

DESCRIPTION
   Mandatory Options:
	 -s  HMMSEARCH file to parse.
	 -m  INDEX file	that contains a	list of	HMMSEARCH files	for multiple
	     parsing.

   Special Options:
	 --po	 Print only the	hits that have positive	scores.
	 --ps	 Print the total of positive scores found.
	 --help	 Show this documentation.

FEEDBACK
   Mailing Lists
       User feedback is	an integral part of the	evolution of this and other
       Bioperl modules.	Send your comments and suggestions preferably to the
       Bioperl mailing list. Your participation	is much	appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About	the mailing lists

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs	and their resolution. Bug reports can be submitted via the
       web:

	 https://github.com/bioperl/bioperl-live/issues

AUTHOR
	 Mauricio Herrera Cuadra <mauricio at open-bio.org>

perl v5.24.1			  2017-07-08		 BP_PARSE_HMMSEARCH(1)

NAME | SYNOPSIS | DESCRIPTION | FEEDBACK | AUTHOR

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