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BP_LOCAL_TAXONOMYDB_QUUser1Contributed Perl DocumeBP_LOCAL_TAXONOMYDB_QUERY(1)

NAME
       bp_local_taxonomydb_query - query a local TaxonomyDB for	species	or
       taxonid

DESCRIPTION
       This script provides an example implementation of access	to a local
       Taxonomy	database implemented with Berkeley DB (DB_File module is
       needed).

       Usage:

	bp_local_taxonomydb_query.PLS: [-v] --nodes nodes.dmp --names names.dmp	"Genus1	species1" "Genus2 species2"

       Providing the nodes.dmp and names.dmp files from	the NCBI Taxonomy dump
       (see Bio::DB::Taxonomy::flatfile	for more info) is only necessary on
       the first time running.	This will create the local indexes and may
       take quite a long time.	However	once created, these indexes will allow
       fast access for species to taxon	id OR taxon id to species name
       lookups.

perl v5.32.1			  2019-12-07	  BP_LOCAL_TAXONOMYDB_QUERY(1)

NAME | DESCRIPTION

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