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BP_GCCALC(1)	      User Contributed Perl Documentation	  BP_GCCALC(1)

NAME
       bp_gccalc - GC content of nucleotide sequences

SYNOPSIS
	 bp_gccalc [-f/--format	FORMAT]	[-h/--help] filename
	 or
	 bp_gccalc [-f/--format	FORMAT]	< filename
	 or
	 bp_gccalc [-f/--format	FORMAT]	-i filename

DESCRIPTION
       This scripts prints out the GC content for every	nucleotide sequence
       from the	input file.

OPTIONS
       The default sequence format is fasta.

       The sequence input can be provided using	any of the three methods:

       unnamed argument
	    bp_gccalc filename

       named argument
	    bp_gccalc -i filename

       standard	input
	    bp_gccalc <	filename

FEEDBACK
   Mailing Lists
       User feedback is	an integral part of the	evolution of this and other
       Bioperl modules.	Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About	the mailing lists

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs	and their resolution. Bug reports can be submitted via the
       web:

	 https://github.com/bioperl/bioperl-live/issues

AUTHOR - Jason Stajich
       Email jason@bioperl.org

HISTORY
       Based on	script code (see bottom) submitted by cckim@stanford.edu

       Submitted as part of bioperl script project 2001/08/06

perl v5.24.1			  2017-07-08			  BP_GCCALC(1)

NAME | SYNOPSIS | DESCRIPTION | OPTIONS | FEEDBACK | AUTHOR - Jason Stajich | HISTORY

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