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Bio::TreeIO::tabtree(3User Contributed Perl DocumentatiBio::TreeIO::tabtree(3)

NAME
       Bio::TreeIO::tabtree - A	simple output format which displays a tree as
       an ASCII	drawing

SYNOPSIS
	 use Bio::TreeIO;
	 my $in	= Bio::TreeIO->new(-file => 'input', -format =>	'newick');
	 my $out = Bio::TreeIO->new(-file => '>output',	-format	=> 'tabtree');

	 while(	my $tree = $in->next_tree ) {
	     $out->write_tree($tree);
	 }

DESCRIPTION
       This is a made up format	just for outputting trees as an	ASCII drawing.

FEEDBACK
   Mailing Lists
       User feedback is	an integral part of the	evolution of this and other
       Bioperl modules.	Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About	the mailing lists

   Support
       Please direct usage questions or	support	issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and
       reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the	problem	with code and
       data examples if	at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs	and their resolution. Bug reports can be submitted via the
       web:

	 https://github.com/bioperl/bioperl-live/issues

AUTHOR - Jason Stajich
       Email jason@bioperl.org

APPENDIX
       The rest	of the documentation details each of the object	methods.
       Internal	methods	are usually preceded with a _

   new
	Title	: new
	Usage	: my $obj = Bio::TreeIO::tabtree->new();
	Function: Builds a new Bio::TreeIO::tabtree object
	Returns	: Bio::TreeIO::tabtree
	Args	:

   write_tree
	Title	: write_tree
	Usage	: $treeio->write_tree($tree);
	Function: Write	a tree out to data stream in newick/phylip format
	Returns	: none
	Args	: Bio::Tree::TreeI object

   next_tree
	Title	: next_tree
	Usage	:
	Function: Sorry	not possible with this format
	Returns	: none
	Args	: none

perl v5.32.1			  2019-12-07	       Bio::TreeIO::tabtree(3)

NAME | SYNOPSIS | DESCRIPTION | FEEDBACK | AUTHOR - Jason Stajich | APPENDIX

Want to link to this manual page? Use this URL:
<https://www.freebsd.org/cgi/man.cgi?query=Bio::TreeIO::tabtree&sektion=3&manpath=FreeBSD+13.0-RELEASE+and+Ports>

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