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Bio::Tools::Phylo::PhyUser:Contributed PBio::Tools::Phylo::Phylip::ProtDist(3)

NAME
       Bio::Tools::Phylo::Phylip::ProtDist - parser for	ProtDist output

SYNOPSIS
	   use Bio::Tools::Phylo::Phylip::ProtDist;
	   my $parser =	Bio::Tools::Phylo::Phylip::ProtDist->new(-file => 'outfile');
	   while( my $result = $parser->next_matrix) {
	     # do something with it
	   }

DESCRIPTION
       A parser	for ProtDist output into a Bio::Matrix::PhylipDist object.
       See also	Bio::Matrix::IO::phylip	this module may	go away.

FEEDBACK
   Mailing Lists
       User feedback is	an integral part of the	evolution of this and other
       Bioperl modules.	Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About	the mailing lists

   Support
       Please direct usage questions or	support	issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and
       reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the	problem	with code and
       data examples if	at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs	and their resolution. Bug reports can be submitted via the
       web:

	 https://github.com/bioperl/bioperl-live/issues

AUTHOR - Shawn Hoon
       Email shawnh@fugu-sg.org

APPENDIX
       The rest	of the documentation details each of the object	methods.
       Internal	methods	are usually preceded with a _

   new
	Title	: new
	Usage	: my $obj = Bio::Tools::Phylo::Phylip::ProtDist->new();
	Function: Builds a new Bio::Tools::Phylo::Phylip::ProtDist object
	Returns	: Bio::Tools::ProtDist
	Args	: -fh/-file => $val, # for initing input, see Bio::Root::IO
		  -program  => 'programname' # name of the program

   next_matrix
	Title	: next_matrix
	Usage	: my $matrix = $parser->next_matrix
	Function: Get the next result set from parser data
	Returns	: L<Bio::Matrix::PhylipDist>
	Args	: none

perl v5.32.1			  2019-1Bio::Tools::Phylo::Phylip::ProtDist(3)

NAME | SYNOPSIS | DESCRIPTION | FEEDBACK | AUTHOR - Shawn Hoon | APPENDIX

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