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Bio::Search::Result::WUsereContributed Perl Bio::Search::Result::WABAResult(3)

NAME
       Bio::Search::Result::WABAResult - Result	object for WABA	alignment
       output

SYNOPSIS
       # use this object exactly as you	would a	GenericResult #	the only extra
       method is query_database	which is the # name of the file	where the
       query sequence came from

DESCRIPTION
       This object is for WABA result output, there is little difference
       between this object and a GenericResult save the	addition of one	method
       query_database.	Expect many of the fields for GenericResult to be
       empty however as	WABA was not intended to provide a lot of extra
       information other than the alignment.

FEEDBACK
   Mailing Lists
       User feedback is	an integral part of the	evolution of this and other
       Bioperl modules.	Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About	the mailing lists

   Support
       Please direct usage questions or	support	issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and
       reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the	problem	with code and
       data examples if	at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs	and their resolution. Bug reports can be submitted via the
       web:

	 https://github.com/bioperl/bioperl-live/issues

AUTHOR - Jason Stajich
       Email jason@bioperl.org

APPENDIX
       The rest	of the documentation details each of the object	methods.
       Internal	methods	are usually preceded with a _

   new
	Title	: new
	Usage	: my $obj = Bio::Search::Result::WABAResult->new();
	Function: Builds a new Bio::Search::Result::WABAResult object
	Returns	: Bio::Search::Result::WABAResult
	Args	: -query_database => "name of the database where the query came	from"

   query_database
	Title	: query_database
	Usage	: $obj->query_database($newval)
	Function: Data field for the database filename where the
		  query	sequence came from
	Returns	: value	of query_database
	Args	: newvalue (optional)

   All other methods are inherited from	Bio::Search::Result::GenericResult
       See the Bio::Search::Result::GenericResult for complete documentation
       of the rest of the methods that are available for this module.

perl v5.24.1			  2017-07-08Bio::Search::Result::WABAResult(3)

NAME | SYNOPSIS | DESCRIPTION | FEEDBACK | AUTHOR - Jason Stajich | APPENDIX

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