Skip site navigation (1)Skip section navigation (2)

FreeBSD Manual Pages

  
 
  

home | help
Bio::Phylo::Parsers::TUser(Contributed Perl DocumBio::Phylo::Parsers::Table(3)

NAME
       Bio::Phylo::Parsers::Table - Parser used	by Bio::Phylo::IO, no
       serviceable parts inside

DESCRIPTION
       This module is used to import data and taxa from	plain text files or
       strings.	 The following additional argument must	be used	in the call to
       Bio::Phylo::IO:

	-type => (one of [DNA|RNA|STANDARD|PROTEIN|NUCLEOTIDE|CONTINUOUS])

       In addition, these arguments may	be used	to indicate line separators
       (default	is "\n") and field separators (default is "\t"):

	-fieldsep => '\t',
	-linesep  => '\n'

SEE ALSO
       There is	a mailing list at
       <https://groups.google.com/forum/#!forum/bio-phylo> for any user	or
       developer questions and discussions.

       Bio::Phylo::IO
	   The table parser is called by the Bio::Phylo::IO object.  Look
	   there to learn how to parse tab- (or	otherwise) delimited matrices.

       Bio::Phylo::Manual
	   Also	see the	manual:	Bio::Phylo::Manual and
	   <http://rutgervos.blogspot.com>

CITATION
       If you use Bio::Phylo in	published research, please cite	it:

       Rutger A	Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase
       Miller, 2011. Bio::Phylo	- phyloinformatic analysis using Perl.	BMC
       Bioinformatics 12:63.  <http://dx.doi.org/10.1186/1471-2105-12-63>

perl v5.24.1			  2014-02-08	 Bio::Phylo::Parsers::Table(3)

NAME | DESCRIPTION | SEE ALSO | CITATION

Want to link to this manual page? Use this URL:
<https://www.freebsd.org/cgi/man.cgi?query=Bio::Phylo::Parsers::Table&sektion=3&manpath=FreeBSD+12.0-RELEASE+and+Ports>

home | help