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Bio::MAGETAB::ArrayDesUser3Contributed Perl DocumeBio::MAGETAB::ArrayDesign(3)

NAME
       Bio::MAGETAB::ArrayDesign - MAGE-TAB array design class

SYNOPSIS
	use Bio::MAGETAB::ArrayDesign;

DESCRIPTION
       This class is used to store information about array designs in MAGE-
       TAB. This class can represent information from an ADF, or a reference
       to an array design in a database. See the DatabaseEntry class for
       superclass methods.

ATTRIBUTES
       name (required)
	 The name of the array design (data type: String).

       version (optional)
	 The version of	the array design (data type: String).

       uri (optional)
	 A URI for the array design (data type:	Uri).

       provider	(optional)
	 The provider (typically the manufacturer) of the array	design (data
	 type: String).

       technologyType (optional)
	 The technology	type of	the array (data	type:
	 Bio::MAGETAB::ControlledTerm).

       surfaceType (optional)
	 The surface type of the array (data type:
	 Bio::MAGETAB::ControlledTerm).

       substrateType (optional)
	 The substrate type of the array (data type:
	 Bio::MAGETAB::ControlledTerm).

       printingProtocol	(optional)
	 The protocol used for printing	the array (data	type: String).

       sequencePolymerType (optional)
	 The sequence polymer type of the array	(data type:
	 Bio::MAGETAB::ControlledTerm).

       designElements (optional)
	 A list	of array design	elements (Features, Reporters and
	 CompositeElements) describing the array (data type:
	 Bio::MAGETAB::DesignElement).

       comments	(optional)
	 A list	of user-defined	comments for the array design (data type:
	 Bio::MAGETAB::Comment).

METHODS
       Each attribute has accessor (get_*) and mutator (set_*) methods,	and
       also predicate (has_*) and clearer (clear_*) methods where the
       attribute is optional. Where an attribute represents a one-to-many
       relationship the	mutator	accepts	an arrayref and	the accessor returns
       an array.

SEE ALSO
       Bio::MAGETAB::DatabaseEntry

AUTHOR
       Tim F. Rayner <tfrayner@gmail.com>

LICENSE
       This library is released	under version 2	of the GNU General Public
       License (GPL).

perl v5.32.0			  2013-01-13	  Bio::MAGETAB::ArrayDesign(3)

NAME | SYNOPSIS | DESCRIPTION | ATTRIBUTES | METHODS | SEE ALSO | AUTHOR | LICENSE

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