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Bio::Annotation::TypeMUsereContributed Perl DocBio::Annotation::TypeManager(3)

NAME
       Bio::Annotation::TypeManager - Manages types for	annotation collections

SYNOPSIS
	   # default type manager

	   $tm = Bio::Annotation::TypeManager->new();

	   # $key is a string or a Bio::Ontology::TermI	compliant object
	   print "The type for $key is ",$tm->type_for_key($key),"\n";

	   if( !$tm->is_valid($key,$object) ) {
	       $self->throw("Invalid object for	key $key");
	   }

DESCRIPTION
       Manages types for annotation collections.

FEEDBACK
   Mailing Lists
       User feedback is	an integral part of the	evolution of this and other
       Bioperl modules.	Send your comments and suggestions preferably
	to one of the Bioperl mailing lists.  Your participation is much
       appreciated.

	 bioperl-l@bioperl.org

   Support
       Please direct usage questions or	support	issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and
       reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the	problem	with code and
       data examples if	at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track
       the bugs	and their resolution.  Bug reports can be submitted via	the
       web:

	 https://github.com/bioperl/bioperl-live/issues

AUTHOR - Ewan Birney
       Email birney@ebi.ac.uk

APPENDIX
       The rest	of the documentation details each of the object	methods.
       Internal	methods	are usually preceded with a _

   new
	Title	: new
	Usage	:
	Function:
	Example	:
	Returns	:
	Args	:

   type_for_key
	Title	: type_for_key
	Usage	:
	Function:
	Example	:
	Returns	:
	Args	:

   is_valid
	Title	: is_valid
	Usage	:
	Function:
	Example	:
	Returns	:
	Args	:

   _add_type_map
	Title	: _add_type_map
	Usage	:
	Function:
	Example	:
	Returns	:
	Args	:

perl v5.32.0			  2019-12-07   Bio::Annotation::TypeManager(3)

NAME | SYNOPSIS | DESCRIPTION | FEEDBACK | AUTHOR - Ewan Birney | APPENDIX

Want to link to this manual page? Use this URL:
<https://www.freebsd.org/cgi/man.cgi?query=Bio::Annotation::TypeManager&sektion=3&manpath=FreeBSD+12.2-RELEASE+and+Ports>

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