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add_wchstr(3), add_wchnstr(3), wadd_wchstr(3), wadd_wchnstr(3), mvadd_wchstr(3), mvadd_wchnstr(3), mvwadd_wchstr(3), mvwadd_wchnstr(3)
add an array of complex characters (and attributes) to a curses window
addchstr(3), addchnstr(3), waddchstr(3), waddchnstr(3), mvaddchstr(3), mvaddchnstr(3), mvwaddchstr(3), mvwaddchnstr(3)
add a string of characters (and attributes) to a curses window
addstr(3), addnstr(3), waddstr(3), waddnstr(3), mvaddstr(3), mvaddnstr(3), mvwaddstr(3), mvwaddnstr(3)
add a string of characters to a curses window and advance cursor
addwstr(3), addnwstr(3), waddwstr(3), waddnwstr(3), mvaddwstr(3), mvaddnwstr(3), mvwaddwstr(3), mvwaddnwstr(3)
add a string of wide characters to a curses window and advance cursor
asa(1)
interpret carriage-control characters
border_set(3), wborder_set(3), box_set(3), hline_set(3), whline_set(3), mvhline_set(3), mvwhline_set(3), vline_set(3), wvline_set(3), mvvline_set(3), mvwvline_set(3)
create curses borders or lines using complex characters and renditions
btowc(3), wctob(3)
convert between wide and single-byte characters
euc(5)
EUC encoding of wide characters
fgetwln(3)
get a line of wide characters from a stream
fgetws(3)
get a line of wide characters from a stream
fputws(3)
output a line of wide characters to a stream
get_wstr(3), getn_wstr(3), wget_wstr(3), wgetn_wstr(3), mvget_wstr(3), mvgetn_wstr(3), mvwget_wstr(3), mvwgetn_wstr(3)
get an array of wide characters from a curses terminal keyboard
getch(3), wgetch(3), mvgetch(3), mvwgetch(3), ungetch(3), has_key(3)
get (or push back) characters from curses terminal keyboard
in_wchstr(3), in_wchnstr(3), win_wchstr(3), win_wchnstr(3), mvin_wchstr(3), mvin_wchnstr(3), mvwin_wchstr(3), mvwin_wchnstr(3)
get an array of complex characters and renditions from a curses window
inchstr(3), inchnstr(3), winchstr(3), winchnstr(3), mvinchstr(3), mvinchnstr(3), mvwinchstr(3), mvwinchnstr(3)
get a string of characters (and attributes) from a curses window
instr(3), innstr(3), winstr(3), winnstr(3), mvinstr(3), mvinnstr(3), mvwinstr(3), mvwinnstr(3)
get a string of characters from a curses window
inwstr(3), innwstr(3), winwstr(3), winnwstr(3), mvinwstr(3), mvinnwstr(3), mvwinwstr(3), mvwinnwstr(3)
get a string of wchar_t characters from a curses window
lessecho(1)
expand metacharacters
mandoc_char(7)
mandoc special characters
strings(1)
print the strings of printable characters in files
strpbrk(3)
locate multiple characters in string
tr(1)
translate characters
unvis(3), strunvis(3), strnunvis(3), strunvisx(3), strnunvisx(3)
decode a visual representation of characters
vis(1)
display non-printable characters in a visual format
vis(3), nvis(3), strvis(3), stravis(3), strnvis(3), strvisx(3), strnvisx(3), strenvisx(3), svis(3), snvis(3), strsvis(3), strsnvis(3), strsvisx(3), strsnvisx(3), strsenvisx(3)
visually encode characters
RkCvtHan(3), RkCvtHan / RkwCvtHan(3)
convert double-width symbols, alphanumeric characters, hiragana, and katakana to single-width characters
RkCvtZen(3)
convert ASCII characters and single-width katakana to double-width characters
Tcl_UniCharIsAlnum.tcl85(3), Tcl_UniCharIsAlnum(3), Tcl_UniCharIsAlpha(3), Tcl_UniCharIsControl(3), Tcl_UniCharIsDigit(3), Tcl_UniCharIsGraph(3), Tcl_UniCharIsLower(3), Tcl_UniCharIsPrint(3), Tcl_UniCharIsPunct(3), Tcl_UniCharIsSpace(3), Tcl_UniCharIsUpper(3), Tcl_UniCharIsWordChar(3)
routines for classification of Tcl_UniChar characters
Tcl_UniCharIsAlnum.tcl86(3), Tcl_UniCharIsAlnum(3), Tcl_UniCharIsAlpha(3), Tcl_UniCharIsControl(3), Tcl_UniCharIsDigit(3), Tcl_UniCharIsGraph(3), Tcl_UniCharIsLower(3), Tcl_UniCharIsPrint(3), Tcl_UniCharIsPunct(3), Tcl_UniCharIsSpace(3), Tcl_UniCharIsUpper(3), Tcl_UniCharIsWordChar(3)
routines for classification of Tcl_UniChar characters
Tcl_UniCharIsAlnum.tcl87(3), Tcl_UniCharIsAlnum(3), Tcl_UniCharIsAlpha(3), Tcl_UniCharIsControl(3), Tcl_UniCharIsDigit(3), Tcl_UniCharIsGraph(3), Tcl_UniCharIsLower(3), Tcl_UniCharIsPrint(3), Tcl_UniCharIsPunct(3), Tcl_UniCharIsSpace(3), Tcl_UniCharIsUpper(3), Tcl_UniCharIsUnicode(3), Tcl_UniCharIsWordChar(3)
routines for classification of Tcl_UniChar characters
Tcl_UniCharToLower.tcl85(3), Tcl_UniCharToUpper(3), Tcl_UniCharToLower(3), Tcl_UniCharToTitle(3), Tcl_UtfToUpper(3), Tcl_UtfToLower(3), Tcl_UtfToTitle(3)
routines for manipulating the case of Unicode characters and UTF-8 strings
Tcl_UniCharToLower.tcl86(3), Tcl_UniCharToUpper(3), Tcl_UniCharToLower(3), Tcl_UniCharToTitle(3), Tcl_UtfToUpper(3), Tcl_UtfToLower(3), Tcl_UtfToTitle(3)
routines for manipulating the case of Unicode characters and UTF-8 strings
Tcl_UniCharToLower.tcl87(3), Tcl_UniCharToUpper(3), Tcl_UniCharToLower(3), Tcl_UniCharToTitle(3), Tcl_UtfToUpper(3), Tcl_UtfToLower(3), Tcl_UtfToTitle(3)
routines for manipulating the case of Unicode characters and UTF-8 strings
Uchar(3o)
Unicode characters
WordType(3)
defines a word in term of allowed characters, length etc
XDrawString(3), XDrawString16(3)
draw text characters
aa_scrheight(3)
returns height of the output screen in characters
aa_scrwidth(3)
returns width of the output screen in characters
activateCDKGraph(3), activateCDKGraph destroyCDKGraph drawCDKGraph eraseCDKGraph getCDKGraphBox getCDKGraphCharacter getCDKGraphCharacters getCDKGraphDisplayType getCDKGraphValue getCDKGraphValues moveCDKGraph newCDKGraph positionCDKGraph setCDKGraph setCDKGraphBackgroundAttrib setCDKGraphBackgroundColor setCDKGraphBox setCDKGraphBoxAttribute setCDKGraphCharacter setCDKGraphCharacters setCDKGraphDisplayType setCDKGraphHorizontalChar setCDKGraphLLChar setCDKGraphLRChar setCDKGraphULChar setCDKGraphURChar setCDKGraphValue setCDKGraphValues setCDKGraphVerticalChar cdk_graph(3)
curses graph widget
add_wchstr(3x), add_wchnstr(3x), wadd_wchstr(3x), wadd_wchnstr(3x), mvadd_wchstr(3x), mvadd_wchnstr(3x), mvwadd_wchstr(3x), mvwadd_wchnstr(3x)
add an array of complex characters (and attributes) to a curses window
addchstr(3x), addchnstr(3x), waddchstr(3x), waddchnstr(3x), mvaddchstr(3x), mvaddchnstr(3x), mvwaddchstr(3x), mvwaddchnstr(3x)
add a string of characters (and attributes) to a curses window
addstr(3x), addnstr(3x), waddstr(3x), waddnstr(3x), mvaddstr(3x), mvaddnstr(3x), mvwaddstr(3x), mvwaddnstr(3x)
add a string of characters to a curses window and advance cursor
addwstr(3x), addnwstr(3x), waddwstr(3x), waddnwstr(3x), mvaddwstr(3x), mvaddnwstr(3x), mvwaddwstr(3x), mvwaddnwstr(3x)
add a string of wide characters to a curses window and advance cursor
border_set(3x), wborder_set(3x), box_set(3x), hline_set(3x), whline_set(3x), mvhline_set(3x), mvwhline_set(3x), vline_set(3x), wvline_set(3x), mvvline_set(3x), mvwvline_set(3x)
create curses borders or lines using complex characters and renditions
cgiEscape(3)
HTML escape certain characters in a string
chkascii(1)
a small C program that checks whether a file is purely ASCII plain-text or else contains any non-ASCII characters
cw(1)
sound characters as Morse code on the soundcard or console speaker
cwgen(1)
generate groups of random characters for Morse code practice
deurlname(1)
Remove URL-encoded characters from file names
eq(3), ecq(3)
string equality test. countchar, countchar2, countstr count characters and strings within the string. replace, replace_detach, limittextwidth miscellaneous text functions
escape(1)
escape shell special characters in a string
explain_fgetc_or_die(3)
input of characters and report errors require_index { "input of characters and report errors" }
explain_fputc_or_die(3)
output of characters and report errors require_index { "output of characters and report errors" }
explain_getc_or_die(3)
input of characters and report errors require_index { "input of characters and report errors" }
explain_getchar_or_die(3)
input of characters and report errors require_index { "input of characters and report errors" }
explain_putc_or_die(3)
output of characters and report errors require_index { }
explain_putchar_or_die(3)
output of characters and report errors require_index { "output of characters and report errors" }
extract_font_range(3)
Extracts a range of characters from a font. Allegro game programming library
fcft_kerning(3)
calculate kerning distance between two wide characters
fcft_precompose(3)
pre-compose two wide characters into one
figlet(6), FIGlet(6)
display large characters made up of ordinary screen characters
firestring_estr_munch(3)
remove characters from the beginning of an estring
fish_key_reader(1)
explore what characters keyboard keys send
fontglide(6)
characters float onto the screen to form words
fribidi_get_bidi_types(3)
get bidi types for an string of characters
fribidi_get_bracket_types(3)
get bracketed characters
fribidi_get_joining_types(3)
get joining types for an string of characters
get_wstr(3x), getn_wstr(3x), wget_wstr(3x), wgetn_wstr(3x), mvget_wstr(3x), mvgetn_wstr(3x), mvwget_wstr(3x), mvwgetn_wstr(3x)
get an array of wide characters from a curses terminal keyboard
getch(3x), wgetch(3x), mvgetch(3x), mvwgetch(3x), ungetch(3x), has_key(3x)
get (or push back) characters from curses terminal keyboard
gtr(1), tr(1)
translate or delete characters
in_wchstr(3x), in_wchnstr(3x), win_wchstr(3x), win_wchnstr(3x), mvin_wchstr(3x), mvin_wchnstr(3x), mvwin_wchstr(3x), mvwin_wchnstr(3x)
get an array of complex characters and renditions from a curses window
inchstr(3x), inchnstr(3x), winchstr(3x), winchnstr(3x), mvinchstr(3x), mvinchnstr(3x), mvwinchstr(3x), mvwinchnstr(3x)
get a string of characters (and attributes) from a curses window
instr(3x), innstr(3x), winstr(3x), winnstr(3x), mvinstr(3x), mvinnstr(3x), mvwinstr(3x), mvwinnstr(3x)
get a string of characters from a curses window
inwstr(3x), innwstr(3x), winwstr(3x), winnwstr(3x), mvinwstr(3x), mvinnwstr(3x), mvwinwstr(3x), mvwinnwstr(3x)
get a string of wchar_t characters from a curses window
japana(1)
HTTP proxy converting Japanese characters into ASCII
juyin-learn(1)
show Chinese characters' phonations
lessecho(1)
expand metacharacters
libowfat_scan_charsetnskip(3), scan_charsetnskip(3)
skip characters from set
libowfat_scan_noncharsetnskip(3), scan_noncharsetnskip(3)
skip characters not from set
mandoc_char(7)
mandoc special characters
mchar_map_charset(3m17n)
Call a function for all the characters in a specified charset
mchartable_map(3m17n)
Call a function for characters in a chartable
mchartable_range(3m17n)
Search for characters that have non-default value
mchartable_set_range(3m17n)
Assign a value to the characters in the specified range
mflt_run(3m17n)
Layout characters with an FLT
mtext_copy(3m17n)
Copy characters in the specified range into an M-text
mtext_cspn(3m17n)
Search an M-text for the complement of a set of characters
mtext_del(3m17n)
Delete characters in the specified range destructively
mtext_len(3m17n)
Number of characters in M-text
mtext_ncpy(3m17n)
Copy the first some characters in an M-text to another
mtext_pbrk(3m17n)
Search an M-text for any of a set of characters
mtext_spn(3m17n)
Search an M-text for a set of characters
ordchr(3am)
convert characters to strings and vice versa
paicc(1), paint_changed_characters(1)
paicc
panda_setcharacterspacing(3)
set the space between characters
rumakeindex(1)
process a LaTeX index using Russian Cyrillic characters
sansi(1)
-- StripANSI; strip ANSI escape sequences/characters from text files
strdel(3)
delete characters from beginning of string
strequate(3)
map a list of characters to the same value
strings(1)
print the sequences of printable characters in files
strings(1)
print the strings of printable characters in files
strmaxcpy(3)
copy at most a given number of characters of string
strset(3)
set all characters in a string to a given character
strshuffle(3)
make the characters in a string be in random order
toilet(1), TOIlet(1)
display large colourful characters
transpose_font(3)
Transposes all characters in a font. Allegro game programming library
unicode_emoji_lookup(3), unicode_emoji(3), unicode_emoji_presentation(3), unicode_emoji_modifier(3), unicode_emoji_modifier_base(3), unicode_emoji_component(3), unicode_emoji_extended_pictographic(3)
look up unicode characters Unicode Emoji Classification
unihist(1)
Generate a histogram of the characters in a Unicode file
uniname(1)
Name the characters in a Unicode text file
urxvt-block-graphics-to-ascii(1), block-graphics-to-ascii(1)
map block graphics to ascii characters
ustrlen(3)
Tells the number of characters in a string. Allegro game programming library
utf8trans(1)
Transliterate UTF-8 characters according to a table
vfs_catia(8)
translate illegal characters in Catia filenames
viz(1)
Makes invisible characters visible; binary file lister
xfd(1)
display all the characters in an X font
yodlstriproff(1)
strip ASCII control characters
Badger::Codec::HTML(3)
encode and decode reserved characters in HTML
Bio::NEXUS::CharactersBlock(3)
Represents a CHARACTERS Block (Data or Characters) of a NEXUS file
Bio::NEXUS::Tools::GraphicsParams(3), Graphics(3)
represents a character block (Data or Characters) of a NEXUS file
Bio::NEXUS::Tools::NexPlotter(3), nexplot.pl(3)
PostScript plot of tree + data table (from NEXUS infile) =head1 SYNOPSIS nexplot.pl [options] foo.nex [tree_name] > foo.ps =head1 OPTIONS -h Brief help message -d Full documentation -v Verbose mode -V Print version information and quit -f Specify output file (default: STDOUT) INFORMATION TO DISPLAY -b Turn on bootstrap values, if any -i Turn on internal node labeling -t Tree only (ignore any characters) -I Specify character block (by "Title") to be used in matrix (e.g. "dna", "protein", "intron") -m Matrix only (ignore any trees) -c Cladogram mode: (auto if no branch lengths present in tree) normal: all branch lengths equal accelerated: same as normal except OTUs are aligned at end -U Display taxa sets in color (-U "set1 color1 [set2 color2 ...]") Color options are red, orange, green, forest, aqua, blue, purple, pink, brown, gray, black PLOT FORMATTING -r Right-justify labels (default: left-justified) -C Columns of characters per block (default = 10) -T Specify tree width (longest branch; default: 10") -S Spacing (vertically) between OTUs (default: .25") -R Ratio of font height to Spacing (default: 0.8; rec: 0.5-1) -F Font to use for labels and titles -B Draw a box indicating postscriptes bounds of the plot area -g Include gray lines after OTU labels, even if -t (tree only) option is used PAGE SETUP -s Print on multiple pages, but shrink to page height -o Print on multiple pages at actual size -W Specify output page width (default: 8.5") -H Specify output page height (default: 11") -a Change page dimensions to fit plot =head1 DESCRIPTION B<This program> will read a NEXUS file and output a PostScript display of trees (one file for each tree in the tree block), as well as any character matrix (e.g. sequences) if present in the file. =head1 FILES =over 4 =back =head1 VERSION $Id: NexPlotter.pm,v 1.2 2008/06/16 19:53:41 astoltzfus Exp $
Bio::Phylo::Matrices::Characters(3)
Container of character objects
BorderStyle::ASCII::SingleLine(3)
Single line border with ASCII characters
BorderStyle::ASCII::SingleLineHorizontalOnly(3)
Single line border with ASCII characters, horizontal only
BorderStyle::ASCII::SingleLineInnerOnly(3)
Single line border with ASCII characters, between columns only
BorderStyle::ASCII::SingleLineOuterOnly(3)
Single line border with ASCII characters, outer borders only
BorderStyle::ASCII::SingleLineVerticalOnly(3)
Single line border with ASCII characters, vertical only
BorderStyle::BoxChar::SingleLine(3)
Single line border with box-drawing characters
BorderStyle::BoxChar::SingleLineHorizontalOnly(3)
Single line border with box-drawing characters, horizontal only
BorderStyle::BoxChar::SingleLineInnerOnly(3)
Single line border with box-drawing characters, between columns only
BorderStyle::BoxChar::SingleLineOuterOnly(3)
Single line border with box-drawing characters, outer borders only
BorderStyle::BoxChar::SingleLineVerticalOnly(3)
Single line border with box-drawing characters, vertical only
BorderStyle::UTF8::DoubleLine(3)
Double-line border with UTF8 characters
BorderStyle::UTF8::SingleLine(3)
Single-line border with UTF8 characters
BorderStyle::UTF8::SingleLineBold(3)
Bold single-line border with UTF8 characters
BorderStyle::UTF8::SingleLineBoldHeader(3)
Single-line border (header box bold) with UTF8 characters
BorderStyle::UTF8::SingleLineCurved(3)
Single-line border with UTF8 characters, curved edges
BorderStyle::UTF8::SingleLineHorizontalOnly(3)
Single line border with box-drawing characters, horizontal only
BorderStyle::UTF8::SingleLineInnerOnly(3)
Single line border with UTF8 characters, between columns only
BorderStyle::UTF8::SingleLineOuterOnly(3)
Single line border with UTF8 characters, outer borders only
BorderStyle::UTF8::SingleLineVerticalOnly(3)
Single line border with UTF8 characters, vertical only
Goo::TabAwareEditor(3), TabAwareEditor(3)
Use the TabConverter to fix characters
Goo::TabConverter(3)
Convert tab characters to four spaces
HTML::FormFu::Constraint::ASCII(3)
ASCII Characters Constraint
HTML::FormFu::Constraint::Printable(3)
Printable Characters Constraint
HTML::FormFu::Filter::NonNumeric(3)
filter removing all non-numeric characters
JavaScript::Squish(3)
Reduce/Compact JavaScript code to as few characters as possible
LaTeX::Encode(3)
encode characters for LaTeX formatting
Lingua::JA::Moji(3)
Handle many kinds of Japanese characters
PPI::Token::Structure(3)
Token class for characters that define code structure
PPIx::Regexp::Token::GroupType::Switch(3)
Represent the introducing characters for a switch
Perl::Critic::Policy::CodeLayout::RequireASCII(3)
Disallow high-bit characters
Perl::Critic::Policy::RegularExpressions::ProhibitEscapedMetacharacters(3)
Use character classes for literal meta-characters instead of escapes
Perl::Critic::Policy::ValuesAndExpressions::ProhibitEscapedCharacters(3)
Write ""eN{DELETE}"" instead of ""ex7F"", etc
String::Dump(3)
Dump strings of characters (or bytes) for printing and debugging
Text::ASCIITable(3)
Create a nice formatted table using ASCII characters
Text::Ngrams(3)
Flexible Ngram analysis (for characters, words, and more)
Text::Unaccent::PurePerl(3)
remove accents from characters
Text::WideChar::Util(3)
Routines for text containing wide characters
Text::WrapI18N(3)
Line wrapping module with support for multibyte, fullwidth, and combining characters and languages without whitespaces between words
URI::Escape(3)
Percent-encode and percent-decode unsafe characters
Unicode::Escape(3)
Escape and unescape Unicode characters other than ASCII
Unicode::String(3)
String of Unicode characters (UTF-16BE)
Unicode::UTF8simple(3)
Conversions to/from UTF8 from/to charactersets
VM::EC2::DB::CharacterSet(3)
An RDS Database Engine Character Set
WWW::Mechanize::FormFiller::Value::Random::Chars(3)
Fill characters into an HTML form field
XML::Elemental::Characters(3)
a generic characters object
XML::Filter::BufferText(3)
Filter to put all characters() in one event
XML::RSS::Parser::Characters(3)
an object representing a character data in an RSS parse tree
ascii(1), unicode(1)
interpret ASCII, Unicode characters
bytes(3)
Perl pragma to expose the individual bytes of characters
dtudcfonted(1)
Edit user-defined characters
dumpstr(1)
Dump strings of characters on the command line
figlet.pl(1)
display large characters made up of ordinary screen characters
fish_key_reader(1)
explore what characters keyboard keys send
fix_latin(1)
filters a data stream that is predominantly utf8 and 'fixes' any latin (ie: non-ASCII 8 bit) characters
g.dirseps(1), g.dirseps (1)
Internal GRASS utility for converting directory separator characters. Converts any directory separator characters in the input string to or from native host format, and writes the changed path to standard output. Useful in scripts for Windows compatibility
js_compactor(1)
Command line utility to reduce JavaScript code to as few characters as possible
keyboard(7)
how to type characters
minifig.pl(1)
display large characters made up of ordinary screen characters
native2ascii(1)
Creates localizable applications by converting a file with characters in any supported character encoding to one with ASCII and/or Unicode escapes or vice versa
p(1)
browse or page through files and filter unprintable characters
string-escape(1)
escape special characters
strings(1)
print the sequences of printable characters in files
strings(1)
print the strings of printable characters in files
tickit_string_get(3)
obtain the characters from a counted string
tickit_term_erasech(3)
erase characters from the terminal
tickit_utf8_count(3), tickit_utf8_countmore(3)
count characters in Unicode strings
tr(1)
translate characters
translit(1)
translates characters
unichars(1)
list characters for one or more properties
unicode(3)
Functions for converting Unicode characters
uniprops(1)
list unicode properties for one or more characters
uniquote(1)
escape special characters using various quoting conventions
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